miRBase entry: sko-mir-4830b

Stem-loop sko-mir-4830b


Accession
MI0017573
Description
Saccoglossus kowalevskii sko-mir-4830b precursor miRNA


Sequence

uaagucuguuuuuguCUCUUGAGUGCCAUAUGGAGGAcaaaagcguucuauuUCUCCUUAUGCACCCCAGAGAcaaaaacuaacauu
...((..((((((((((((.(.((((.(((.((((((..............)))))).))))))).).))))))))))))..))...

Structure
uaa  cu            U A    C   U      caaaag 
   gu  guuuuuguCUCU G GUGC AUA GGAGGA      c
   ||  |||||||||||| | |||| ||| ||||||       
   ca  caaaaacAGAGA C CACG UAU CCUCUu      g
uua  au            C C    -   U      uaucuu 


Annotation confidence Not enough data
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Genome context
GL014282.1: 5091-5177 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from sko-mir-4830b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sko-miR-4830b-5p

Accession MIMAT0020042
Description Saccoglossus kowalevskii sko-miR-4830b-5p mature miRNA
Sequence 16 - CUCUUGAGUGCCAUAUGGAGGA - 37
Evidence experimental
454 [1]

Mature sko-miR-4830b-3p

Accession MIMAT0020043
Description Saccoglossus kowalevskii sko-miR-4830b-3p mature miRNA
Sequence 53 - UCUCCUUAUGCACCCCAGAGA - 73
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27