Stem-loop sko-mir-4836

Accession

MI0017581

Description

Saccoglossus kowalevskii sko-mir-4836 precursor miRNA

Sequence

acuuuauagggugucucaAAAGUUUUGGUCCCUGAAGAaguucgcaagaguucuuCUCAGGUAUUGAAACUUUUCGGacacucguauaaccg
...(((((((((((((.((((((((((((.(((((.((((..(......)..))))))))).)))))))))))).)))))))).)))))...

Structure

acu     -        c            C     A    uu gc 
   uuaua gggugucu aAAAGUUUUGGU CCUGA GAag  c  a
   ||||| |||||||| |||||||||||| ||||| ||||  |   
   aauau cucacaGG UUUUCAAAGUUA GGACU Cuuc  g  a
gcc     g        C            U     -    uu ag 

Annotation confidence Not enough data

Genome context

GL011256.1: 574547-574638 [+]

Mature sko-miR-4836-5p

• Accession: MIMAT0020053
• Description: Saccoglossus kowalevskii sko-miR-4836-5p mature miRNA
• Sequence: 19 - AAAGUUUUGGUCCCUGAAGA - 38
• Evidence: experimental ; 454 [1]

Mature sko-miR-4836-3p

• Accession: MIMAT0020054
• Description: Saccoglossus kowalevskii sko-miR-4836-3p mature miRNA
• Sequence: 56 - CUCAGGUAUUGAAACUUUUCGG - 77
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27