miRBase entry: sko-mir-4830d

Stem-loop sko-mir-4830d


Accession
MI0017583
Description
Saccoglossus kowalevskii sko-mir-4830d precursor miRNA


Sequence

agugguuugugucuugcuggggUCUCUUGAGAGCCAUAUGGAGGaauugaauaguauuguccUCCAUAGGUCCUCCAGAGUCCucaguagauaaaaccuauc
...(((((.(((((.(((((((.((((.(((.(((.(((((((((..............)))))))))))).))).)))).)))))))))))))))))....

Structure
-agu     g     u       U    U   A   A         auugaa 
    gguuu ugucu gcugggg CUCU GAG GCC UAUGGAGGa      u
    ||||| ||||| ||||||| |||| ||| ||| |||||||||       
    ccaaa auaga ugacuCC GAGA CUC UGG AUACCUccu      a
cuau     -     -       U    C   C   -         guuaug 


Annotation confidence Not enough data
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Genome context
GL016280.1: 32659-32760 [-]

Database links

Mature sko-miR-4830d-5p

Accession MIMAT0020056
Description Saccoglossus kowalevskii sko-miR-4830d-5p mature miRNA
Sequence 23 - UCUCUUGAGAGCCAUAUGGAGG - 44
Evidence experimental
454 [1]

Mature sko-miR-4830d-3p

Accession MIMAT0020057
Description Saccoglossus kowalevskii sko-miR-4830d-3p mature miRNA
Sequence 63 - UCCAUAGGUCCUCCAGAGUCC - 83
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27