miRBase entry: sko-mir-4841-1

Stem-loop sko-mir-4841-1


Accession
MI0017587
Description
Saccoglossus kowalevskii sko-mir-4841-1 precursor miRNA
Gene family
MIPF0001264; mir-4841


Sequence

uuagaaauaacguguUGUGAUAGUUGUCUUAUUCUCCugcuuuuaauaccgagaauaaguccauuguugcaccauguuauuuccac
...(((((((((((.(((((((((.(.(((((((((..............))))))))).).))))))))).)))))))))))...

Structure
uua           u         U U         Cugcuu 
   gaaauaacgug UGUGAUAGU G CUUAUUCUC      u
   ||||||||||| ||||||||| | |||||||||       
   cuuuauuguac acguuguua c gaauaagag      u
cac           c         c u         ccauaa 


Annotation confidence Not enough data
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Genome context
GL012229.1: 76561-76646 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from sko-mir-4841-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sko-miR-4841

Accession MIMAT0020061
Description Saccoglossus kowalevskii sko-miR-4841 mature miRNA
Sequence 16 - UGUGAUAGUUGUCUUAUUCUCC - 37
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27