miRBase entry: spu-mir-4848a

Stem-loop spu-mir-4848a


Accession
MI0017597
Description
Strongylocentrotus purpuratus spu-mir-4848a precursor miRNA
Gene family
MIPF0001265; mir-4848


Sequence

auuaguacuuuUGGGUUGAGGCUUUUGGGCAGGAgcggcagcguccaaccguaaccuaagugacuuug
...(((.(.(((((((((.((...((((((....((....)))))))))).))))))))).))))...

Structure
auu   a u         A  CUU      AGGA  g 
   agu c uuUGGGUUG GG   UUGGGC    gc g
   ||| | ||||||||| ||   ||||||    ||  
   uca g gaauccaau cc   aaccug    cg c
guu   - u         g  ---      ----  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KN916992.1: 18905-18972 [+]

Database links

Mature spu-miR-4848a

Accession MIMAT0020070
Description Strongylocentrotus purpuratus spu-miR-4848a mature miRNA
Sequence 12 - UGGGUUGAGGCUUUUGGGCAGGA - 34
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27