miRBase entry: bfl-mir-4860

Stem-loop bfl-mir-4860


Accession
MI0017613
Description
Branchiostoma floridae bfl-mir-4860 precursor miRNA
Gene family
MIPF0001765; mir-4860


Sequence

acucucUGCCUGUCAACGUCUCUGUACAgugaacaugaggcaugUGUAGAGAUUGUGUGACGGGUAGUgagccc
.(((.(((((((((((((((((((((((((.........)).)))))))))).))).)))))))))).)))...

Structure
--a   u          -   -          -  gaa 
   cuc cUGCCUGUCA ACG UCUCUGUACA gu   c
   ||| |||||||||| ||| |||||||||| ||   a
   gag GAUGGGCAGU UGU AGAGAUGUgu cg   u
ccc   U          G   U          a  gag 


Annotation confidence Not enough data
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Genome context
GG666538.1: 1823456-1823529 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bfl-mir-4860
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bfl-miR-4860-5p

Accession MIMAT0020088
Description Branchiostoma floridae bfl-miR-4860-5p mature miRNA
Sequence 7 - UGCCUGUCAACGUCUCUGUACA - 28
Evidence experimental
454 [1]

Mature bfl-miR-4860-3p

Accession MIMAT0020089
Description Branchiostoma floridae bfl-miR-4860-3p mature miRNA
Sequence 45 - UGUAGAGAUUGUGUGACGGGUAGU - 68
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27