miRBase entry: bfl-mir-4862

Stem-loop bfl-mir-4862

Accession

MI0017615

Description

Branchiostoma floridae bfl-mir-4862 precursor miRNA

Sequence

cugaucACGCGUUUAUGUCUGCGCCUGUcuacuguuaaacacAGGUACAGGCAUAAACUCGAGAuuau
.(((((.((.(((((((((((.((((((............)))))).))))))))))).)).))))).

Structure

c     A  C           C      cuacu 
 ugauc CG GUUUAUGUCUG GCCUGU     g
 ||||| || ||||||||||| ||||||      
 auuAG GC CAAAUACGGAC UGGAca     u
u     A  U           A      caaau

Annotation confidence Not enough data

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Genome context

GG666534.1: 218827-218894 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from bfl-mir-4862

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature bfl-miR-4862-5p

Accession	MIMAT0020091
Description	Branchiostoma floridae bfl-miR-4862-5p mature miRNA
Sequence	7 - ACGCGUUUAUGUCUGCGCCUGU - 28
Evidence	experimental 454 [1]

Mature bfl-miR-4862b*

Accession	MIMAT0020092
Description	Branchiostoma floridae bfl-miR-4862b* mature miRNA
Sequence	43 - AGGUACAGGCAUAAACUCGAGA - 64
Evidence

References

PubMed ID: 21210939
microRNA complements in deuterostomes: origin and evolution of microRNAs
"Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
"Evol Dev (2011) 13:15-27