miRBase entry: bfl-mir-4874

Stem-loop bfl-mir-4874


Accession
MI0017637
Description
Branchiostoma floridae bfl-mir-4874 precursor miRNA
Gene family
MIPF0001843; mir-4874


Sequence

gccguuuuauccccgcccAGUUUGUAGCAUCCAGCUGAGCUggcagaccugcagcagCUGGCUGGUUGGUGCAAACAGGgggaggauggaccuc
.....(((((((((.(((.(((((((.((.((((((.((((((((....)))..))))))))))).)).))))))).))))).)))))))....

Structure
gccgu       -  g   A       G  U      G     --   g 
     uuuaucc cc ccc GUUUGUA CA CCAGCU AGCUg  gca a
     ||||||| || ||| ||||||| || |||||| |||||  |||  
     agguagg gg gGG CAAACGU GU GGUCGG UCgac  cgu c
-cucc       a  -   A       G  U      -     ga   c 


Annotation confidence Not enough data
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Genome context
GG666602.1: 1687479-1687572 [-]

Database links

Mature bfl-miR-4874-5p

Accession MIMAT0020453
Description Branchiostoma floridae bfl-miR-4874-5p mature miRNA
Sequence 19 - AGUUUGUAGCAUCCAGCUGAGCU - 41
Evidence experimental
454 [1]

Mature bfl-miR-4874-3p

Accession MIMAT0020454
Description Branchiostoma floridae bfl-miR-4874-3p mature miRNA
Sequence 58 - CUGGCUGGUUGGUGCAAACAGG - 79
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27