miRBase entry: bfl-mir-4875c

Stem-loop bfl-mir-4875c


Accession
MI0017640
Description
Branchiostoma floridae bfl-mir-4875c precursor miRNA


Sequence

guuuuugucggcuuucuauguuguaccggcggccggcggauaugaagaaaacggCACAAAAUAGAAAGCCCGAGAaaggug
.(((((.((((((((((((.((((.(((.....(..((....))..)....))).)))).)))))))).)))).)))))..

Structure
-g     g    -        g    a   gcggc gg  g 
  uuuuu ucgg cuuucuau uugu ccg     c  cg a
  ||||| |||| |||||||| |||| |||     |  ||  
  ggaaA AGCC GAAAGAUA AACA ggc     g  gu u
gu     G    C        A    C   -aaaa aa  a 


Annotation confidence Not enough data
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Genome context
GG666627.1: 748149-748229 [+]

Database links

Mature bfl-miR-4875c-3p

Accession MIMAT0020457
Description Branchiostoma floridae bfl-miR-4875c-3p mature miRNA
Sequence 55 - CACAAAAUAGAAAGCCCGAGA - 75
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27