miRBase entry: bfl-mir-4882b

Stem-loop bfl-mir-4882b


Accession
MI0017650
Description
Branchiostoma floridae bfl-mir-4882b precursor miRNA


Sequence

guaagucugacugaucacacuuguaggacuucucccuuuaaguauacaggGGAGAAACCUUUCAGGUGUCUUcagcauggcugaa
...((((((.((((..(((((((.(((..(((((((((.........))))))))).)))..)))))))..)))))).))))...

Structure
gua    -  a    uc       -u   ac         uaa 
   aguc ug cuga  acacuug  agg  uucucccuu   g
   |||| || ||||  |||||||  |||  |||||||||   u
   ucgg ac gacU  UGUGGAC  UCC  AAGAGGgga   a
aag    u  -    UC       UU   -A         cau 


Annotation confidence Not enough data
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Genome context
GG666631.1: 1699499-1699583 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from bfl-mir-4882b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bfl-miR-4882b

Accession MIMAT0020467
Description Branchiostoma floridae bfl-miR-4882b mature miRNA
Sequence 51 - GGAGAAACCUUUCAGGUGUCUU - 72
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27