miRBase entry: bfl-mir-4888

Stem-loop bfl-mir-4888


Accession
MI0017658
Description
Branchiostoma floridae bfl-mir-4888 precursor miRNA
Gene family
MIPF0001724; mir-4888


Sequence

guguggggUGCAGAGCUUGUGCGAUUGGCGCuugacgacgaagagcgccacacgcgagcucuucaucccaacc
...(((((((.((((((((((.(..((((((((.........))))))))).)))))))))).)))))))...

Structure
gug       C          C AU        gac 
   uggggUG AGAGCUUGUG G  UGGCGCuu   g
   ||||||| |||||||||| |  ||||||||   a
   acccuac ucucgagcgc c  accgcgag   c
cca       u          a --        aag 


Annotation confidence Not enough data
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Genome context
GG666578.1: 2480055-2480127 [-]

Database links

Mature bfl-miR-4888

Accession MIMAT0020475
Description Branchiostoma floridae bfl-miR-4888 mature miRNA
Sequence 9 - UGCAGAGCUUGUGCGAUUGGCGC - 31
Evidence experimental
454 [1]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27