Stem-loop xbo-mir-219

Accession

MI0017688

Description

Xenoturbella bocki xbo-mir-219 precursor miRNA

Gene family

MIPF0000044; mir-219

Sequence

ggcccgguuaaguuucgaacauUGAUUGUCCAAACGCAAUUCUUUcugguuauaaaugaagagaacuguguauggacgucagugcucguggcuag
..........((((.(((.(((((((.(((((.(((((.((((((.(.(((...))).))))))).))))).)))))))))))).))).))))..

Structure

ggcccgguua    u   a       U     A     A      c g   a 
          aguu cga cauUGAU GUCCA ACGCA UUCUUU u guu  
          |||| ||| ||||||| ||||| ||||| |||||| | ||| u
          ucgg gcu gugacug caggu ugugu aagaga a uaa  
--------ga    u   c       -     a     c      - g   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature xbo-miR-219

• Accession: MIMAT0020122
• Description: Xenoturbella bocki xbo-miR-219 mature miRNA
• Sequence: 23 - UGAUUGUCCAAACGCAAUUCUUU - 45
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21307940
   Acoelomorph flatworms are deuterostomes related to Xenoturbella
   "Philippe H, Brinkmann H, Copley RR, Moroz LL, Nakano H, Poustka AJ, Wallberg A, Peterson KJ, Telford MJ"
   "Nature (2011) 470:255-258