miRBase entry: dme-mir-4917

Stem-loop dme-mir-4917


Accession
MI0017700
Description
Drosophila melanogaster dme-mir-4917 precursor miRNA


Sequence

88 reads, 38 reads per million, 23 experiments
gugaguagcgaugggggucagauggccguggaagauaugugacgauugcccccuUACUACUAUCGUCUGCUCAACAg
.(((((((((((((.(((.((..((((((.(........).)))...)))..)).))).)))))).)))))))....

Structure
---g       -      g   c  au   ---   g aag 
    ugaguag cgaugg ggu ag  ggc   cgu g   a
    ||||||| |||||| ||| ||  |||   ||| |    
    ACUCGUC GCUAUC UCA uc  ccg   gca u   u
gACA       U      A   U  cc   uua   g gua 


Annotation confidence Not enough data
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Genome context
chrX: 14199545-14199621 [+]

Database links

Mature dme-miR-4917-3p

Accession MIMAT0020511
Description Drosophila melanogaster dme-miR-4917-3p mature miRNA
Sequence 55 - UACUACUAUCGUCUGCUCAACA - 76
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 21177960
    Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans
    "Chung WJ, Agius P, Westholm JO, Chen M, Okamura K, Robine N, Leslie CS, Lai EC"
    "Genome Res (2011) 21:286-300