miRBase entry: cel-mir-4925

Stem-loop cel-mir-4925


Accession
MI0017712
Description
Caenorhabditis elegans cel-mir-4925 precursor miRNA


Sequence

17 reads, 0 reads per million, 4 experiments
guaagugcauauguuucaaaaacuuguucaaauuguUUUCGAAAACAUUGCAUUUACAG
(((((((((.(((((((.(((((...........))))).).)))))))))))))))..

Structure
--         u      - a     uugu 
  guaagugca auguuu c aaaac    u
  ||||||||| |||||| | |||||    c
  CAUUUACGU UACAAA G UUUug    a
GA         -      A C     uuaa 


Annotation confidence Not enough data
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Genome context
chrX: 1879562-1879620 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from cel-mir-4925
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cel-miR-4925

Accession MIMAT0020132
Description Caenorhabditis elegans cel-miR-4925 mature miRNA
Sequence 37 - UUUCGAAAACAUUGCAUUUACAG - 59
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 21177960
    Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans
    "Chung WJ, Agius P, Westholm JO, Chen M, Okamura K, Robine N, Leslie CS, Lai EC"
    "Genome Res (2011) 21:286-300