Stem-loop sequence cel-mir-4925

Accession MI0017712
Description Caenorhabditis elegans miR-4925 stem-loop
Stem-loop 
--         u      - a     uugu 
  guaagugca auguuu c aaaac    u
  ||||||||| |||||| | |||||    c
  cauuuacgu uacaaa g uuuug    a
ga         -      a c     uuaa
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Genome context
Coordinates (WBcel215) Overlapping transcripts
X: 1879556-1879614 [+]
sense
Y59E1B.1 ; Y59E1B.1; intron 2
Y59E1B.1 ; Y59E1B.1; intron 2
Y59E1B.1 ; Y59E1B.1; intron 2
Clustered miRNAs
< 10kb from cel-mir-4925
cel-mir-4807 X: 1872460-1872520 [+]
cel-mir-4808 X: 1872946-1873002 [+]
cel-mir-4809 X: 1873640-1873698 [+]
cel-mir-2220 X: 1873821-1873878 [+]
cel-mir-4810 X: 1875732-1875788 [+]
cel-mir-1018 X: 1879452-1879507 [+]
cel-mir-4925 X: 1879556-1879614 [+]
cel-mir-4923b X: 1879634-1879692 [+]
cel-mir-4923a X: 1879870-1879930 [+]
cel-mir-4921 X: 1879973-1880032 [+]

Mature sequence cel-miR-4925

Accession MIMAT0020132
Sequence

37 -  

uuucgaaaacauugcauuuacag

 - 59

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Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:21177960 "Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans" Chung WJ, Agius P, Westholm JO, Chen M, Okamura K, Robine N, Leslie CS, Lai EC Genome Res. 21:286-300(2011).