Stem-loop sequence cel-mir-4933

Accession

MI0017719 (change log)

Description

Caenorhabditis elegans miR-4933 stem-loop

Stem-loop

   ------------------cucgugagcuu        c               uu     cag 
5'                              gccagaau gguggcagugaccua  cuggc   a
                                |||||||| |||||||||||||||  |||||    
3'                              cggucuua ccaccgucgcugggu  gaccg   u
   caccgucgcaggguuggaccgaucuagac        a               ug     auc 

Deep sequencing

24 reads, 0 reads per million, 8 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (WBcel235; GCA_000002985.3): chrII: 13182606-13182715 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0017719

Mature sequence cel-miR-4933

• Accession: MIMAT0020139
• Sequence: 23 - uggcagugaccuauucuggcca - 44
• Deep sequencing: 5 reads, 3 experiments
• Evidence: experimental; 454 [1]

References

1. PMID:21129974 "MicroRNAs both promote and antagonize longevity in C. elegans" de Lencastre A, Pincus Z, Zhou K, Kato M, Lee SS, Slack FJ Curr Biol. 20:2159-2168(2010).