Stem-loop cel-mir-4938

Accession

MI0017724

Description

Caenorhabditis elegans cel-mir-4938 precursor miRNA

Sequence

24 reads, 2 reads per million, 3 experiments

uccguauugcugccacauugacAUCAUCAUGCAUCAUCAGCAUGCugcgcagagccugaaaugauaaauguuguugucaaaauauuauugcaaccgacgaauaauuuaaa
..(((.((((.......((((((.((.(((..((((((((...(((......)))))))..))))..))).)).)))))).........))))...)))...........

Structure

---------uc   --a    --ugccaca      U  U   GC    --    CAU   gc 
           cgu   uugc         uugacA CA CAU  AUCA  UCAG   GCu  g
           |||   ||||         |||||| || |||  ||||  ||||   |||   
           gca   aacg         aacugu gu gua  uagu  aguc   cga  c
aaauuuaauaa   gcc    uuauuauaa      u  u   aa    aa    ---   ga 

Annotation confidence Not enough data

Genome context

chrIII: 5785117-5785226 [+]

Mature cel-miR-4938

• Accession: MIMAT0020144
• Description: Caenorhabditis elegans cel-miR-4938 mature miRNA
• Sequence: 23 - AUCAUCAUGCAUCAUCAGCAUGC - 45
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21129974
   MicroRNAs both promote and antagonize longevity in C. elegans
   "de Lencastre A, Pincus Z, Zhou K, Kato M, Lee SS, Slack FJ"
   "Curr Biol (2010) 20:2159-2168