Stem-loop sequence dme-mir-4974

Accession MI0017760
Description Drosophila melanogaster miR-4974 stem-loop
Stem-loop 
uucuu    -uu     cc      a        ug      g    a au 
     uguu   uauuc  ugucag gaguauau  auuuua gugg c  u
     ||||   |||||  |||||| ||||||||  |||||| |||| |   
     auaa   auaag  auaguc cuuauaua  uaaaau uacc g  u
ucuau    uuu     aa      -        ua      a    a cg
Get sequence
Deep sequencing
37 reads, 9 experiments
Genome context
Coordinates (BDGP5.0) Overlapping transcripts
2L: 21263933-21264034 [+]
sense
FBtr0114602 ; CG8671-RC; intron 2
FBtr0081483 ; CG8671-RA; intron 2
FBtr0081484 ; CG8671-RB; intron 2
FBtr0114602 ; CG8671-RC; intron 2
FBtr0081483 ; CG8671-RA; intron 2
FBtr0081484 ; CG8671-RB; intron 2
FBtr0114602 ; CG8671-RC; intron 2
FBtr0081483 ; CG8671-RA; intron 2
FBtr0081484 ; CG8671-RB; intron 2

Mature sequence dme-miR-4974-5p

Accession MIMAT0020203
Sequence

23 -  

agagaguauauugauuuuaggu

 - 44

Get sequence
Deep sequencing 2 reads, 1 experiments
Evidence experimental; Solexa [1]
Predicted targets

Mature sequence dme-miR-4974-3p

Accession MIMAT0020204
Sequence

60 -  

uauaaaauauauauauuccuga

 - 81

Get sequence
Deep sequencing 24 reads, 5 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:21177969 "Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence" Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC Genome Res. 21:203-215(2011).