Stem-loop dme-mir-4974

Accession

MI0017760

Description

Drosophila melanogaster dme-mir-4974 precursor miRNA

Sequence

20 reads, 5 reads per million, 15 experiments

uucuuuguuuuuauucccugucAGAGAGUAUAUUGAUUUUAGGUggacauuugcgaccaUAUAAAAUAUAUAUAUUCCUGAuaaagaauauuuaauauaucu
...........(((((..((((((.((((((((..((((((.((((.(......).)))).))))))..))))))))))))))..)))))............

Structure

-uucuuuguuuu     cc      A        UG      G    a au 
            uauuc  ugucAG GAGUAUAU  AUUUUA GUgg c  u
            |||||  |||||| ||||||||  |||||| |||| |   
            auaag  auAGUC CUUAUAUA  UAAAAU Uacc g  u
ucuauauaauuu     aa      -        UA      A    a cg 

Annotation confidence Not enough data

Genome context

chr2L: 21263933-21264034 [+]

Mature dme-miR-4974-5p

• Accession: MIMAT0020203
• Description: Drosophila melanogaster dme-miR-4974-5p mature miRNA
• Sequence: 23 - AGAGAGUAUAUUGAUUUUAGGU - 44
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4974-3p

• Accession: MIMAT0020204
• Description: Drosophila melanogaster dme-miR-4974-3p mature miRNA
• Sequence: 60 - UAUAAAAUAUAUAUAUUCCUGA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215