miRBase entry: dme-mir-4975

Stem-loop dme-mir-4975


Accession
MI0017761
Description
Drosophila melanogaster dme-mir-4975 precursor miRNA


Sequence

68 reads, 11 reads per million, 29 experiments
gggcaaauaaagcacguugcucccugUUUACUUGGGUUUUCUGUUCAuuucgccuaucgaacguugaacuuaaaaagccacgaucaguuguuuaacauacagauaucucug
((((((..........)))))).(((.((...(((.((((..(((((.((((.....))))...)))))...)))).))).)).)))............((((....))))

Structure
-gggcaaauaaagcacguugcucc   U  ACU   G    -CU     --u    c 
                        cug UU   UGG UUUU   GUUCA   uucg c
                        ||| ||   ||| ||||   |||||   |||| u
                        gac ag   acc aaaa   caagu   aagc a
gucucuauagacauacaauuuguu   u  --c   g    auu     ugc    u 


Annotation confidence Not enough data
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Genome context
chr2R: 6707163-6707273 [-]

Database links

Mature dme-miR-4975-5p

Accession MIMAT0020205
Description Drosophila melanogaster dme-miR-4975-5p mature miRNA
Sequence 27 - UUUACUUGGGUUUUCUGUUCA - 47
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21177969
    Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
    "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
    "Genome Res (2011) 21:203-215