Stem-loop dme-mir-4976

Accession

MI0017762

Description

Drosophila melanogaster dme-mir-4976 precursor miRNA

Sequence

343 reads, 80 reads per million, 27 experiments

gucgaugccggcguuucccgcUCCAGGCUGUCGUCCAUGGAGUuuguguugucagcauucagcUCGGUGGAUGUCAGCCAGCGguggaaggcgucgucucgcu
(.(((((((....(((((((((...(((((.(((((((.(((((.(((((...)))))..))))).))))))).)))))))))).))))))))))).).....

Structure

----- u       ggcg    -     CCA     U       G     -u     g 
     g cgaugcc    uuuc ccgcU   GGCUG CGUCCAU GAGUu  guguu  
     | |||||||    |||| |||||   ||||| ||||||| |||||  ||||| u
     c gcugcgg    aagg gGCGA   CCGAC GUAGGUG CUcga  uacga  
ucgcu u       ----    u     ---     U       G     cu     c 

Annotation confidence Not enough data

Genome context

chr2R: 6835533-6835635 [-]

Mature dme-miR-4976-5p

• Accession: MIMAT0020206
• Description: Drosophila melanogaster dme-miR-4976-5p mature miRNA
• Sequence: 22 - UCCAGGCUGUCGUCCAUGGAGU - 43
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4976-3p

• Accession: MIMAT0020207
• Description: Drosophila melanogaster dme-miR-4976-3p mature miRNA
• Sequence: 64 - UCGGUGGAUGUCAGCCAGCG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215