Stem-loop dme-mir-4977

Accession

MI0017763

Description

Drosophila melanogaster dme-mir-4977 precursor miRNA

Sequence

38 reads, 44 reads per million, 20 experiments

uaacccuccgcucgagaacguggUUUCUUUUGCGACGUGCAAUAcucuguggcagaagUCUUGCACCGUUCCAAAAGAGAGcagcacguggagcgacgagaacgg
.....((((((((.(.....((.(((((((((.(((((((((.((((((...))).))).))))).)))).))))))))).)).....).)))))..))).....

Structure

uaacc   --     g gaacg  g         C    -     U   -   u 
     cuc  cgcuc a     ug UUUCUUUUG GACG UGCAA Acu cug  
     |||  ||||| |     || ||||||||| |||| ||||| ||| ||| g
     gag  gcgag u     ac AGAGAAAAC UUGC ACGUU Uga gac  
ggcaa   ca     g gcacg  G         C    C     C   a   g 

Annotation confidence Not enough data

Genome context

chr2R: 7406733-7406837 [-]

Mature dme-miR-4977-5p

• Accession: MIMAT0020208
• Description: Drosophila melanogaster dme-miR-4977-5p mature miRNA
• Sequence: 24 - UUUCUUUUGCGACGUGCAAUA - 44
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4977-3p

• Accession: MIMAT0020209
• Description: Drosophila melanogaster dme-miR-4977-3p mature miRNA
• Sequence: 59 - UCUUGCACCGUUCCAAAAGAGAG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215