Stem-loop dme-mir-4979

Accession

MI0017765

Description

Drosophila melanogaster dme-mir-4979 precursor miRNA

Literature search

1 open access papers mention dme-mir-4979
(1 sentences)

Sequence

5 reads, 2 reads per million, 4 experiments

cauagguguuauaucuaggccaaauAUAUAUACUUGUUCUAUGUAUUaguuauuugcaaaggaAUACAUGUGCCUGUAUAUAUAUucgguaaaaucacaucuuugaauu
((.((((((.........(((.(((((((((((..((..((((((((..((.......))..)))))))).))..))))))))))).)))......)))))).))....

Structure

----  u      uauaucuag   a           UU  UC        ag  au 
    ca aggugu         gcc aauAUAUAUAC  GU  UAUGUAUU  uu  u
    || ||||||         ||| |||||||||||  ||  ||||||||  ||  u
    gu ucuaca         ugg uUAUAUAUAUG  CG  GUACAUAa  aa  g
uuaa  u      ---cuaaaa   c           UC  -U        gg  ac 

Annotation confidence Not enough data

Genome context

chr2R: 23734033-23734141 [-]

Mature dme-miR-4979-5p

• Accession: MIMAT0020211
• Description: Drosophila melanogaster dme-miR-4979-5p mature miRNA
• Sequence: 26 - AUAUAUACUUGUUCUAUGUAUU - 47
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4979-3p

• Accession: MIMAT0020212
• Description: Drosophila melanogaster dme-miR-4979-3p mature miRNA
• Sequence: 64 - AUACAUGUGCCUGUAUAUAUAU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215