miRBase entry: dme-mir-4983

Stem-loop dme-mir-4983


Accession
MI0017769
Description
Drosophila melanogaster dme-mir-4983 precursor miRNA


Sequence

24 reads, 3 reads per million, 11 experiments
ggcuggcugucuugaccCACUUGCUCGUUUGCAUUUCUGaaaaauguauacgcaaaaaccaaaaucaGAAAUUCUUUUGAGCAAGUGUGucaugaaauugccauucgu
((.((((..((.((((.((((((((((...(.((((((((.....((..........)).....)))))))).)...)))))))))).)))).))....)))).))..

Structure
--  c    --ug  u    c          UUU C        aaaau  auac 
  gg uggc    uc ugac CACUUGCUCG   G AUUUCUGa     gu    g
  || ||||    || |||| ||||||||||   | ||||||||     ||     
  cu accg    ag acuG GUGAACGAGU   C UAAAGacu     ca    c
ug  u    uuaa  u    U          UUU U        aaaac  aaaa 


Annotation confidence Not enough data
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Genome context
chr2R: 19637414-19637521 [+]

Database links

Mature dme-miR-4983-5p

Accession MIMAT0020217
Description Drosophila melanogaster dme-miR-4983-5p mature miRNA
Sequence 18 - CACUUGCUCGUUUGCAUUUCUG - 39
Evidence experimental
Illumina [1]

Mature dme-miR-4983-3p

Accession MIMAT0020218
Description Drosophila melanogaster dme-miR-4983-3p mature miRNA
Sequence 68 - GAAAUUCUUUUGAGCAAGUGUG - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21177969
    Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
    "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
    "Genome Res (2011) 21:203-215