Stem-loop egr-mir-87

Accession

MI0017784

Description

Echinococcus granulosus egr-mir-87 precursor miRNA

Gene family

MIPF0000152; mir-87

Literature search

1 open access papers mention egr-mir-87
(1 sentences)

Sequence

CCACCUGUCAUUUUGCUCGAACCagaguuauucuuggcgucauccaucucucgaaggauguuugcuagguugGUGAGCAAAGUUUCAGGUGU
.((((((..(((((((((..(((((.......(((((((.(((((.((....)).)))))..)))))))))))))))))))))..)))))).

Structure

C      UC         GA     aguuauu       -u     a  u 
 CACCUG  AUUUUGCUC  ACCag       cuuggcg  caucc uc c
 ||||||  |||||||||  |||||       |||||||  ||||| ||  
 GUGGAC  UGAAACGAG  UGguu       ggaucgu  guagg ag u
U      UU         --     -------       uu     a  c 

Annotation confidence Not enough data

Genome context

APAU02000009.1: 962338-962429 [-]

Mature egr-miR-87-5p

• Accession: MIMAT0020238
• Description: Echinococcus granulosus egr-miR-87-5p mature miRNA
• Sequence: 1 - CCACCUGUCAUUUUGCUCGAACC - 23
• Evidence: experimental ; cloned [1], Illumina [2]

Mature egr-miR-87-3p

• Accession: MIMAT0020239
• Description: Echinococcus granulosus egr-miR-87-3p mature miRNA
• Sequence: 73 - GUGAGCAAAGUUUCAGGUGU - 92
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25656283
   microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
   Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
   Parasit Vectors (2015) 8:83