miRBase entry: egr-mir-153

Stem-loop egr-mir-153


Accession
MI0017788
Description
Echinococcus granulosus egr-mir-153 precursor miRNA
Gene family
MIPF0000050; mir-153


Sequence

agucguaaAUGCUUACGAGACGUGCACUCcaguuggaaugguugucaacuaccuuguggaUUGCAUAGUCUCAUAAGUGCCAucgacu
(((((.....(((((.((((((((((.((((...((..(((((...)))))))...)))).))))).))))).))))).....)))))

Structure
     uaaAU     C     -     C    guu  aa     g 
agucg     GCUUA GAGAC GUGCA UCca   gg  ugguu  
|||||     ||||| ||||| ||||| ||||   ||  ||||| u
ucagc     UGAAU CUCUG UACGU aggu   cc  aucaa  
     uACCG     A     A     U    guu  --     c 


Annotation confidence Not enough data
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Genome context
APAU02000047.1: 276191-276278 [-]

Database links

Mature egr-miR-153-3p

Accession MIMAT0020244
Description Echinococcus granulosus egr-miR-153-3p mature miRNA
Sequence 61 - UUGCAUAGUCUCAUAAGUGCCA - 82
Evidence experimental
cloned [1], Illumina [2]

Mature egr-miR-153-5p

Accession MIMAT0037428
Description Echinococcus granulosus egr-miR-153-5p mature miRNA
Sequence 9 - AUGCUUACGAGACGUGCACUC - 29
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 21219906
    Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
    "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
    "Int J Parasitol (2011) 41:439-448

  2. PubMed ID: 25656283
    microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
    Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
    Parasit Vectors (2015) 8:83