miRBase entry: egr-mir-219

Stem-loop egr-mir-219


Accession
MI0017790
Description
Echinococcus granulosus egr-mir-219 precursor miRNA
Gene family
MIPF0000044; mir-219


Sequence

agugcucUGAUUGUCCAUUCGCAUUUCUUGcugcucucguguacaauucacugcucuucaAGAUGUGUGUAUGGGCAUCGCAguacu
((((((.((((.((((((.(((((.(((((..(..(..(((.......))).)..)..))))).))))).)))))))))).))))))

Structure
      c    U      U     U     cu cu uc   ua 
agugcu UGAU GUCCAU CGCAU UCUUG  g  c  gug  c
|||||| |||| |||||| ||||| |||||  |  |  |||  a
ucaugA GCUA CGGGUA GUGUG AGAac  c  g  cac  a
      C    -      U     U     uu uc -u   uu 


Annotation confidence Not enough data
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Genome context
APAU02000015.1: 1031605-1031691 [-]

Database links

Mature egr-miR-219-5p

Accession MIMAT0020246
Description Echinococcus granulosus egr-miR-219-5p mature miRNA
Sequence 8 - UGAUUGUCCAUUCGCAUUUCUUG - 30
Evidence experimental
cloned [1], Illumina [2]

Mature egr-miR-219-3p

Accession MIMAT0037430
Description Echinococcus granulosus egr-miR-219-3p mature miRNA
Sequence 61 - AGAUGUGUGUAUGGGCAUCGCA - 82
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 21219906
    Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
    "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
    "Int J Parasitol (2011) 41:439-448

  2. PubMed ID: 25656283
    microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
    Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
    Parasit Vectors (2015) 8:83