Stem-loop egr-mir-184

Accession

MI0017793

Description

Echinococcus granulosus egr-mir-184 precursor miRNA

Gene family

MIPF0001270; mir-4988

Literature search

2 open access papers mention egr-mir-184
(4 sentences)

Sequence

gauuccacauuguuauACCUAUCACACUUCAGUCCaguacgaauuauguauGGGACGGAAGUCUGAAAGGUUUaaacaugug
.....(((((..(((.((((.(((.(((((.((((.((((.......)))).)))).))))).))).)))).)))..)))))

Structure

gauuc     ug   u    A   C     A    a    ga 
     cacau  uua ACCU UCA ACUUC GUCC guac  a
     |||||  ||| |||| ||| ||||| |||| ||||  u
     gugua  aaU UGGA AGU UGAAG CAGG uaug  u
-----     ca   U    A   C     G    G    ua 

Annotation confidence Not enough data

Genome context

APAU02000032.1: 644065-644146 [+]

Mature egr-miR-184-5p

• Accession: MIMAT0020249
• Description: Echinococcus granulosus egr-miR-184-5p mature miRNA
• Sequence: 17 - ACCUAUCACACUUCAGUCC - 35
• Evidence: experimental ; cloned [1], Illumina [2]

Mature egr-miR-184-3p

• Accession: MIMAT0037432
• Description: Echinococcus granulosus egr-miR-184-3p mature miRNA
• Sequence: 52 - GGGACGGAAGUCUGAAAGGUUU - 73
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25656283
   microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach
   Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC
   Parasit Vectors (2015) 8:83