Stem-loop emu-mir-7

Accession

MI0017802

Description

Echinococcus multilocularis emu-mir-7 precursor miRNA

Gene family

MIPF0000022; mir-7

Sequence

cauugcuuuugUGGAAGACUGGUGAUAUGUUGUaaagcuccccuaccauaCAGCGUAUCGCAGUUUUUCCCUAaaaacauu
...((.(((((.(((((((((.((((((((((((..(........)..))))))))))))))).)))))).))))).))..

Structure

cau  c     U      -   G            aa cuc 
   ug uuuug GGAAGA CUG UGAUAUGUUGUa  g   c
   || ||||| |||||| ||| ||||||||||||  |    
   ac aaaAU CCUUUU GAC GCUAUGCGACau  c   c
-uu  a     C      U   -            ac auc 

Annotation confidence Not enough data

Genome context

scaffold_007780: 4128889-4128969 [-]

Mature emu-miR-7-5p

• Accession: MIMAT0020259
• Description: Echinococcus multilocularis emu-miR-7-5p mature miRNA
• Sequence: 12 - UGGAAGACUGGUGAUAUGUUGU - 33
• Evidence: experimental ; Illumina [2]

Mature emu-miR-7-3p

• Accession: MIMAT0037438
• Description: Echinococcus multilocularis emu-miR-7-3p mature miRNA
• Sequence: 51 - CAGCGUAUCGCAGUUUUUCCCUA - 73
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267