Stem-loop emu-mir-8

Accession

MI0017803

Description

Echinococcus multilocularis emu-mir-8 precursor miRNA

Gene family

MIPF0000019; mir-8

Sequence

cgaggcauugugGUAGUCUUCCGAGCAGUAUAUGGacguuuugauugguccaccguuccaauagcuccUAAUACUGUUCGGUUAGGACGCCacaguggcu
..((.(((((((((.((((((((((((((((..(((.(((...(((((.........)))))))))))..)))))))))))..)))))))))))))).))

Structure

cg  g         A     --           AU   c   uug     ucc 
  ag cauugugGU GUCUU  CCGAGCAGUAU  GGa guu   auugg   a
  || ||||||||| |||||  |||||||||||  ||| |||   |||||   c
  uc gugacaCCG CAGGA  GGCUUGUCAUA  ccu cga   uaacc   c
--  g         -     UU           AU   -   ---     uug 

Annotation confidence Not enough data

Genome context

contig_62152: 876340-876439 [+]

Mature emu-miR-8-3p

• Accession: MIMAT0020260
• Description: Echinococcus multilocularis emu-miR-8-3p mature miRNA
• Sequence: 69 - UAAUACUGUUCGGUUAGGACGCC - 91
• Evidence: experimental ; Illumina [2]

Mature emu-miR-8-5p

• Accession: MIMAT0037439
• Description: Echinococcus multilocularis emu-miR-8-5p mature miRNA
• Sequence: 13 - GUAGUCUUCCGAGCAGUAUAUGG - 35
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267