Stem-loop emu-mir-10

Accession

MI0017805

Description

Echinococcus multilocularis emu-mir-10 precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

CACCCUGUAGACCCGAGUUUGAgugccuagcguacguuccaccguacagacucccaaGCUCGUGUCUUCAAGGAAUCa
...(((..((((.((((((((.(.(.((...(((((......))))))).).).)))))))).))))...))).....

Structure

--CAC   -GU    C        A u c  agc     uu 
     CCU   AGAC CGAGUUUG g g cu   guacg  c
     |||   |||| |||||||| | | ||   |||||   
     GGA   UCUG GCUCGaac c c ga   caugc  c
aCUAA   ACU    U        c u a  ---     ca 

Annotation confidence Not enough data

Genome context

scaffold_007768: 7241879-7241956 [-]

Mature emu-miR-10-5p

• Accession: MIMAT0020262
• Description: Echinococcus multilocularis emu-miR-10-5p mature miRNA
• Sequence: 1 - CACCCUGUAGACCCGAGUUUGA - 22
• Evidence: experimental ; Illumina [2]

Mature emu-miR-10-3p

• Accession: MIMAT0037441
• Description: Echinococcus multilocularis emu-miR-10-3p mature miRNA
• Sequence: 58 - GCUCGUGUCUUCAAGGAAUC - 77
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267