Stem-loop emu-mir-124b

Accession

MI0017810

Description

Echinococcus multilocularis emu-mir-124b precursor miRNA

Gene family

MIPF0000021; mir-124

Sequence

gugaauuugGUAUUCUACGCGAUGUCUUGGUacgagcugacacUAAGGCACGCGGUGAAUACCaaggucc
..((.((((((((((..((((.(((((((((..........)))))))))))))..)))))))))).)).

Structure

gu  a          UA    A         acga 
  ga uuugGUAUUC  CGCG UGUCUUGGU    g
  || ||||||||||  |||| |||||||||     
  cu gaaCCAUAAG  GCGC ACGGAAUca    c
-c  g          UG    -         cagu 

Annotation confidence Not enough data

Genome context

scaffold_007760: 409220-409289 [-]

Mature emu-miR-124b-3p

• Accession: MIMAT0020267
• Description: Echinococcus multilocularis emu-miR-124b-3p mature miRNA
• Sequence: 44 - UAAGGCACGCGGUGAAUACC - 63
• Evidence: experimental ; Illumina [2]

Mature emu-miR-124b-5p

• Accession: MIMAT0037445
• Description: Echinococcus multilocularis emu-miR-124b-5p mature miRNA
• Sequence: 10 - GUAUUCUACGCGAUGUCUUGGU - 31
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267