Stem-loop emu-mir-125

Accession

MI0017811

Description

Echinococcus multilocularis emu-mir-125 precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

caugUCCCUGAGACCCUAGAGUUGUCcggaauuugcgaauccacauuucucgcguggCAACUCUAAUGUCCCGGGUUAugag
((((..((((.(((..((((((((.(((.....(((((...........))))))))))))))))..))).)))).))))..

Structure

--    UC    A   CC        U   gaauu     aucc 
  caug  CCUG GAC  UAGAGUUG Ccg     ugcga    a
  ||||  |||| |||  |||||||| |||     |||||    c
  guAU  GGGC CUG  AUCUCAAC ggu     gcgcu    a
ga    -U    C   UA        -   -----     cuuu 

Annotation confidence Not enough data

Genome context

scaffold_007780: 4869375-4869456 [+]

Mature emu-miR-125-5p

• Accession: MIMAT0020268
• Description: Echinococcus multilocularis emu-miR-125-5p mature miRNA
• Sequence: 5 - UCCCUGAGACCCUAGAGUUGUC - 26
• Evidence: experimental ; Illumina [2]

Mature emu-miR-125-3p

• Accession: MIMAT0037446
• Description: Echinococcus multilocularis emu-miR-125-3p mature miRNA
• Sequence: 58 - CAACUCUAAUGUCCCGGGUUA - 78
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267