Stem-loop emu-mir-184

Accession

MI0017817

Description

Echinococcus multilocularis emu-mir-184 precursor miRNA

Gene family

MIPF0001270; mir-4988

Sequence

gauuccacauuguuauACCUAUCACACUUCAGUCCaguacgaauuguguauGGGACGGAAGUCUGAAAGGUUUaaacaugug
.....(((((..(((.((((.(((.(((((.((((.(((((.....))))).)))).))))).))).)))).)))..)))))

Structure

gauuc     ug   u    A   C     A    a     a 
     cacau  uua ACCU UCA ACUUC GUCC guacg a
     |||||  ||| |||| ||| ||||| |||| ||||| u
     gugua  aaU UGGA AGU UGAAG CAGG uaugu u
-----     ca   U    A   C     G    G     g 

Annotation confidence Not enough data

Genome context

contig_62302: 3441643-3441724 [-]

Mature emu-miR-184-5p

• Accession: MIMAT0020274
• Description: Echinococcus multilocularis emu-miR-184-5p mature miRNA
• Sequence: 17 - ACCUAUCACACUUCAGUCC - 35
• Evidence: experimental ; Illumina [2]

Mature emu-miR-184-3p

• Accession: MIMAT0037451
• Description: Echinococcus multilocularis emu-miR-184-3p mature miRNA
• Sequence: 52 - GGGACGGAAGUCUGAAAGGUUU - 73
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21219906
   Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
   "Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M"
   "Int J Parasitol (2011) 41:439-448


2. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267