Stem-loop gma-MIR164b

Accession

MI0017826

Description

Glycine max gma-MIR164b precursor miRNA

Literature search

18 open access papers mention gma-MIR164b
(38 sentences)

Sequence

227396 reads, 814.0 reads per million, 176 experiments

gcuccuuguUGGAGAAGCAGGGCACGUGCaacucucuaggcucucuuaagcgccauugaacccuuugCACGUGCUCCCCUUCUCCAACac
......(((((((((((..((((((((((((...((..(((.((....)).)))...)).....))))))))))))..))))))))))).

Structure

gcuccu           CA            --cuc  -ua   u  c 
      uguUGGAGAAG  GGGCACGUGCaa     uc   ggc cu u
      |||||||||||  ||||||||||||     ||   ||| ||  
      aCAACCUCUUC  CUCGUGCACguu     ag   ccg ga u
-----c           CC            uccca  uua   c  a 

Annotation confidence High

Genome context

chr10: 1558481-1558570 [+]

Mature gma-miR164b-5p

• Accession: MIMAT0020975
• Description: Glycine max gma-miR164b-5p mature miRNA
• Sequence: 10 - UGGAGAAGCAGGGCACGUGC - 29
• Evidence: experimental ; 454 [1], Illumina [2]

Mature gma-miR164b-3p

• Accession: MIMAT0054172
• Description: Glycine max gma-miR164b-3p mature miRNA
• Sequence: 68 - CACGUGCUCCCCUUCUCCAAC - 88
• Evidence: experimental ; unknown

References

1. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153