Stem-loop gma-MIR166e

Accession

MI0017831

Description

Glycine max gma-MIR166e precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

36 open access papers mention gma-MIR166e
(216 sentences)

Sequence

agguguugaggggaauguuggcuggcucgaggcuuuucaaagaggagguucucacuggcaagaacuauaaggcuUCGGACCAGGCUUCAUUCCCCucaaaaauuguguuu
.....((((((((((((..(.((((.((((((((((..........((((((........))))))..)))))))))).)))).)..))))))))))))...........

Structure

------aggug            uu g    c          ucaaagagga      cac 
           uugaggggaaug  g cugg ucgaggcuuu          gguucu   u
           ||||||||||||  | |||| ||||||||||          ||||||    
           aacuCCCCUUAC  C GACC GGCUucggaa          ucaaga   g
uuuguguuaaa            UU G    A          --------ua      acg 

Annotation confidence Not enough data

Genome context

chr4: 47978621-47978730 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gma-MIR166e

Mature gma-miR166e

• Accession: MIMAT0020980
• Description: Glycine max gma-miR166e mature miRNA
• Sequence: 75 - UCGGACCAGGCUUCAUUCCCC - 95
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506