Stem-loop sequence gma-MIR168b

AccessionMI0017835 (change log)
DescriptionGlycine max miR168b stem-loop
Gene family MIPF0000081; MIR168
Literature search

23 open access papers mention gma-MIR168b
(86 sentences)

Stem-loop 
          ua     c          u     a       -    g   --aa  ga 
5' cggucuc  auucg uuggugcagg cggga ccgguuu ucgc cgg    ug  g
   |||||||  ||||| |||||||||| ||||| ||||||| |||| |||    ||   
3' gccggag  uaagu aacuacguuc gcccu gguuaag ggcg gcc    gc  g
          gc     c          c     a       c    -   gcug  aa
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Glycine_max_v2.0; GCA_000004515.3) Overlapping transcripts
chr1: 48944581-48944690 [-]
intergenic
Database links

Mature sequence gma-miR168b

Accession MIMAT0020985
Sequence

12 -  

ucgcuuggugcaggucggg

 - 30

Get sequence
Evidence experimental; 454 [1], Illumina [2-3]

References

1
PMID:21504877 "MicroRNAs in the shoot apical meristem of soybean" Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL J Exp Bot. 62:2495-2506(2011).
2
PMID:21663675 "Identification of novel soybean microRNAs involved in abiotic and biotic stresses" Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R BMC Genomics. 12:307(2011).
3
PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons" Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ PLoS One. 9:e86153(2014).