Stem-loop sequence gma-MIR319d

Accession

MI0017842 (change log)

Description

Glycine max miR319d stem-loop

Gene family

MIPF0000010; MIR159

Literature search

17 open access papers mention gma-MIR319d
(42 sentences)

Stem-loop

   ----    u            -     c   --       uu   ggauuaa     u  u     a   g   ac           cauagaa   ug  u 
5'     agag gaaggagcuucc uuuag cca  cacaugg  agg       agggu gc gaagu ucu cug  ucauucauaca       uag  au c
       |||| |||||||||||| ||||| |||  |||||||  |||       ||||| || ||||| ||| |||  |||||||||||       |||  ||  
3'     ucuu cuuccucgaggg aaguc ggu  guguauc  ucu       uccua cg uuuua agg gac  aguaagugugu       auc  ua a
   guug    u            g     a   uc       uu   -------     -  -     c   g   ga           uaaugga   gu  a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Glycine_max_v2.0; GCA_000004515.3): chr15: 40974346-40974535 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0017842

Mature sequence gma-miR319d

• Accession: MIMAT0020992
• Sequence: 160 - uggacugaaggggagcuccuuc - 181
• Evidence: experimental; 454 [1]

References

1. PMID:21504877 "MicroRNAs in the shoot apical meristem of soybean" Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL J Exp Bot. 62:2495-2506(2011).