miRBase entry: hsa-mir-5006

Stem-loop hsa-mir-5006


Accession
MI0017873
Symbol
HGNC: MIR5006
Description
Homo sapiens hsa-mir-5006 precursor miRNA

Literature search
1 open access papers mention hsa-mir-5006
(1 sentences)

Sequence

70 reads, 7 reads per million, 28 experiments
aaccauuagggggcugugguUUGCCAGGGCAGGAGGUGGAAgggagccccauuuacagugguaacuuccUUUCCCUUUCCAUCCUGGCAGgcuucagagaacuuuaccag
......(((((..(((.((((((((((((..(((((.(((((((((..(((((...)))))....))))))))))))))..)))))))))))).)))....)))))....

Structure
aaccau     --gg   u            CA     U         --cc     u 
      uaggg    cug gguUUGCCAGGG  GGAGG GGAAgggag    ccauu  
      |||||    ||| ||||||||||||  ||||| |||||||||    ||||| a
      auuuc    gac ucgGACGGUCCU  CUUUC CCUUUccuu    gguga  
--gacc     aaga   u            AC     -         caau     c 


Annotation confidence Not enough data
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Genome context
chr13: 41568286-41568395 [-]

Disease association
hsa-mir-5006 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-5006-5p

Accession MIMAT0021033
Description Homo sapiens hsa-miR-5006-5p mature miRNA
Sequence 21 - UUGCCAGGGCAGGAGGUGGAA - 41
Evidence experimental
Illumina [2]

Mature hsa-miR-5006-3p

Accession MIMAT0021034
Description Homo sapiens hsa-miR-5006-3p mature miRNA
Sequence 70 - UUUCCCUUUCCAUCCUGGCAG - 90
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 21606961
    Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia
    "Schotte D, Akbari Moqadam F, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML"
    "Leukemia (2011) 25:1389-1399

  2. PubMed ID: 21558790
    Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis
    "Hansen TB, Kjems J, Bramsen JB"
    "RNA Biol (2011) 8:378-383