Stem-loop ath-MIR5015

Accession

MI0017883

Description

Arabidopsis thaliana ath-MIR5015 precursor miRNA

Sequence

uuguuguuguuguuguuauuauguuuugcuuucguuaaugucauguguucuguuguugUUGGUGUUAUGUGUAGUCUUCcaugugaaauaucacauagaagacuaaacauaacaucaacaacaccaaaacacauggcauuaacgaaagcaaauggaagacaauggaauuuuag
.........((((((((.((....(((((((((((((((((((((((((.((.(((((((((((((((((.((((((((.((((((....)))))).)))))))).))))))))))))))))).)).)))))))))))))))))))))))))..)).))))))))........

Structure

uuguuguug        a  augu                         c  u                 G        c      a 
         uuguuguu uu    uuugcuuucguuaaugucauguguu ug uguugUUGGUGUUAUGU UAGUCUUC auguga a
         |||||||| ||    ||||||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||  
         gguaacag ag    aaacgaaagcaauuacgguacacaa ac acaacaacuacaauaca aucagaag uacacu u
-gauuuuaa        a  --gu                         a  c                 a        a      a 

Annotation confidence Not enough data

Genome context

chr5: 20554881-20555053 [-]

Mature ath-miR5015

• Accession: MIMAT0020519
• Description: Arabidopsis thaliana ath-miR5015 mature miRNA
• Sequence: 59 - UUGGUGUUAUGUGUAGUCUUC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21357774
   MicroRNA activity in the Arabidopsis male germline
   "Borges F, Pereira PA, Slotkin RK, Martienssen RA, Becker JD"
   "J Exp Bot (2011) 62:1611-1620