Stem-loop ath-MIR5019

Accession

MI0017887

Description

Arabidopsis thaliana ath-MIR5019 precursor miRNA

Sequence

uucugauguaacagcgacaguuugucuuuuccaacaacugauagaaccacguuuuccucuuucguuuaagaguuuuaaucgugaagauauugcagcucuaucaguUGUUGGGAAAGAAAAACUCUUaguuuuacaucagga
(((((((((((.(((...(((((.(((((((((((((((((((((.(((((.((..(((((......)))))....)).))))...........).))))))))))))))))))))).)))))....))))))))))))))

Structure

           c   -gac     g                     a -----------    u  --uc     uc 
uucugauguaa agc    aguuu ucuuuuccaacaacugauaga c           cacg uu    cucuu  g
||||||||||| |||    ||||| ||||||||||||||||||||| |           |||| ||    |||||   
aggacuacauu uug    UCAAA AGAAAGGGUUGUugacuaucu g           gugc aa    gagaa  u
           -   aUUC     A                     c acguuauagaa    u  uuuu     uu 

Annotation confidence Not enough data

Genome context

chr2: 10403230-10403370 [+]

Mature ath-miR5019

• Accession: MIMAT0020523
• Description: Arabidopsis thaliana ath-miR5019 mature miRNA
• Sequence: 106 - UGUUGGGAAAGAAAAACUCUU - 126
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21357774
   MicroRNA activity in the Arabidopsis male germline
   "Borges F, Pereira PA, Slotkin RK, Martienssen RA, Becker JD"
   "J Exp Bot (2011) 62:1611-1620