Stem-loop hme-mir-193

Accession

MI0017928

Description

Heliconius melpomene hme-mir-193 precursor miRNA

Gene family

MIPF0000082; mir-193

Literature search

1 open access papers mention hme-mir-193
(11 sentences)

Sequence

ccagccuuggugAGGGUCUUGGCGGUCUAGUGGGugugcucaguucuUACUGGCCUGCUAAGUCCCAAGcuauggugg
(((.((.((((..(((.((((((((.((((((((...........)))))))).)))))))).)))..)))).)))))

Structure

   g  u    gA   U        U        ugug 
cca cc uggu  GGG CUUGGCGG CUAGUGGG    c
||| || ||||  ||| |||||||| ||||||||    u
ggu gg aucG  CCC GAAUCGUC GGUCAUuc    c
   -  u    AA   U        C        uuga 

Annotation confidence Not enough data

Genome context

HE667780: 841370-841447 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hme-mir-193

Mature hme-miR-193-5p

• Accession: MIMAT0020538
• Description: Heliconius melpomene hme-miR-193-5p mature miRNA
• Sequence: 13 - AGGGUCUUGGCGGUCUAGUGGG - 34
• Evidence: experimental ; Illumina [1]

Mature hme-miR-193-3p

• Accession: MIMAT0020539
• Description: Heliconius melpomene hme-miR-193-3p mature miRNA
• Sequence: 48 - UACUGGCCUGCUAAGUCCCAAG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21266089
   Characterisation and expression of microRNAs in developing wings of the neotropical butterfly Heliconius melpomene
   Surridge AK, Lopez-Gomollon S, Moxon S, Maroja LS, Rathjen T, Nadeau NJ, Dalmay T, Jiggins CD
   BMC Genomics (2011) 12:62