miRBase entry: hsa-mir-5089

Stem-loop hsa-mir-5089


Accession
MI0017978
Symbol
HGNC: MIR5089
Description
Homo sapiens hsa-mir-5089 precursor miRNA


Sequence

52 reads, 6 reads per million, 15 experiments
aaggacuucaGUGGGAUUUCUGAGUAGCAUCcuuggaaucugcacucaagggAUGCUACUCGGAAAUCCCACUGAaguccuuuu
((((((((((((((((((((((((((((((((((.((........)).))))))))))))))))))))))))))))))))))..

Structure
--                                  g  auc 
  aaggacuucaGUGGGAUUUCUGAGUAGCAUCcuu ga   u
  |||||||||||||||||||||||||||||||||| ||    
  uuccugaAGUCACCCUAAAGGCUCAUCGUAggga cu   g
uu                                  a  cac 


Annotation confidence Not enough data
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Genome context
chr17: 46973017-46973100 [+]

Database links

Mature hsa-miR-5089-5p

Accession MIMAT0021081
Description Homo sapiens hsa-miR-5089-5p mature miRNA
Sequence 11 - GUGGGAUUUCUGAGUAGCAUC - 31
Evidence experimental
Illumina [1-2], qPCR [1]

Mature hsa-miR-5089-3p

Accession MIMAT0022984
Description Homo sapiens hsa-miR-5089-3p mature miRNA
Sequence 53 - AUGCUACUCGGAAAUCCCACUGA - 75
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 21785231
    Detection of novel human MiRNAs responding to X-ray irradiation
    "Ding N, Wu X, He J, Chang L, Hu W, Li W, Wang J, Wang T, Zhou G"
    "J Radiat Res (2011) 52:425-432

  2. PubMed ID: 21807764
    Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome
    "Joyce CE, Zhou X, Xia J, Ryan C, Thrash B, Menter A, Zhang W, Bowcock AM"
    "Hum Mol Genet (2011) 20:4025-4040