Stem-loop ssc-mir-486-2

Accession

MI0017992

Description

Sus scrofa ssc-mir-486-2 precursor miRNA

Literature search

12 open access papers mention ssc-mir-486-2
(26 sentences)

Sequence

566 reads, 181 reads per million, 12 experiments

cccugacgggUCCUGUACUGAGCUGCCCCGAGgcccucacugugcccagcucgggccagcucaguacccggcgcgucggggu
((((((((.(((..(((((((((((.((((((((.(.....).)))....))))).)))))))))))..))).)))))))).

Structure

-        g   CU           C     ----   c u 
 cccugacg gUC  GUACUGAGCUG CCCGA    Ggc c c
 |||||||| |||  ||||||||||| |||||    ||| | a
 ggggcugc cgg  caugacucgac gggcu    ccg g c
u        g   cc           c     cgac   u u 

Annotation confidence Not enough data

Genome context

chrUScaf2610: 3466-3547 [-]

Mature ssc-miR-486

• Accession: MIMAT0013886
• Description: Sus scrofa ssc-miR-486 mature miRNA
• Sequence: 11 - UCCUGUACUGAGCUGCCCCGAG - 32
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100