Stem-loop ssc-mir-615

Accession

MI0017995

Description

Sus scrofa ssc-mir-615 precursor miRNA

Gene family

MIPF0000342; mir-615

Literature search

1 open access papers mention ssc-mir-615
(1 sentences)

Sequence

1 reads, 1 reads per million, 1 experiments

gggaggggcgggagggggcuccccggugcucggaucucgagggugcuuauuguucggUCCGAGCCUGGGUCUCCCUCUcccccccacc
((..((((.(((((((((...(((((.((((((((..((((.(.......).)))))))))))))))))...))))))))))))).))

Structure

  ga    c         cuc     u        cu    g ug 
gg  gggg gggaggggg   cccgg gcucggau  cgag g  c
||  |||| |||||||||   ||||| ||||||||  |||| |  u
cc  cccc cccUCUCCC   GGGUC CGAGCCUg  gcuu u  u
  -a    -         UCU     -        --    g ua 

Annotation confidence Not enough data

Genome context

chr5: 19690659-19690746 [-]

Mature ssc-miR-615

• Accession: MIMAT0020595
• Description: Sus scrofa ssc-miR-615 mature miRNA
• Sequence: 58 - UCCGAGCCUGGGUCUCCCUCU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328