miRBase entry: mmu-mir-5134

Stem-loop mmu-mir-5134


Accession
MI0018046
Symbol
MGI: Mir5134
Description
Mus musculus mmu-mir-5134 precursor miRNA


Sequence

164 reads, 8 reads per million, 41 experiments
ugaacagacUUGGCAGAAAGGGCAGCUGUGaugcuuguccuaguuuucACGGGUGGCCCUCUUUCUGCAGguacauuc
.(((...(((((.(((((((((((.((((((.(((......)))..)))))).).)))))..))))))))))...)))

Structure
u   cag     G     --     - G      -u   ug 
 gaa   acUUG CAGAA  AGGGC A CUGUGa  gcu  u
 |||   ||||| |||||  ||||| | ||||||  |||   
 cuu   ugGAC GUCUU  UCCCG U GGCAcu  uga  c
-   aca     -     UC     G G      uu   uc 


Annotation confidence High
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Genome context
chr17: 24234527-24234604 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-5134
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-5134-5p

Accession MIMAT0020645
Description Mus musculus mmu-miR-5134-5p mature miRNA
Sequence 10 - UUGGCAGAAAGGGCAGCUGUG - 30
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mmu-miR-5134-3p

Accession MIMAT0022989
Description Mus musculus mmu-miR-5134-3p mature miRNA
Sequence 49 - ACGGGUGGCCCUCUUUCUGCAG - 70
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 21403133
    Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage
    "Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S"
    "Blood (2011) 117:5340-5349