miRBase entry: osa-MIR5145

Stem-loop osa-MIR5145


Accession
MI0018057
Description
Oryza sativa osa-MIR5145 precursor miRNA


Sequence

62 reads, 53 reads per million, 2 experiments
ccACCUGUUUGGAUUCUUGAGGGCUAauuuaaaauuaaaaugugagagcuaaacauuaguccauagaaccaaacagggccgc
...(((((((((.((((...((((((((..........................))))))))..))))))))))))).....

Structure
--ccA         A    UGA        uuaaaauuaaaa 
     CCUGUUUGG UUCU   GGGCUAau            u
     ||||||||| ||||   ||||||||             
     ggacaaacc aaga   ccugauua            g
cgccg         -    -ua        caaaucgagagu 


Annotation confidence Not enough data
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Genome context
Chr1: 40622637-40622718 [-]

Database links

Mature osa-miR5145

Accession MIMAT0021090
Description Oryza sativa osa-miR5145 mature miRNA
Sequence 3 - ACCUGUUUGGAUUCUUGAGGGCUA - 26
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 21525786
    Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus
    "Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D"
    "RNA Biol (2011) 8:538-547