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miRBase |
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Stem-loop sequence bdi-MIR169e |
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Accession | MI0018114 (change log) | |||||
Description | Brachypodium distachyon miR169e stem-loop | |||||
Gene family | MIPF0000012; MIR169_1 | |||||
Literature search |
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4 open access papers mention bdi-MIR169e | |||||
Stem-loop |
--- ua -u uug -uga u u c ucc ccuu u auu 5' ccu caugg gauaaggggu gccc uagccaagga gacu gccugug aug uc gaucgc ugcaua u ||| ||||| |||||||||| |||| |||||||||| |||| ||||||| ||| || |||||| |||||| 3' gga guacc cuauucuccg uggg aucgguuccu cuga cggacac uau ag cuagug acguau c ucc uc uc --- uccg - - - -uu --cu u aua |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence bdi-miR169e-5p |
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Accession | MIMAT0020689 |
Sequence |
32 - uagccaaggaugacuugccug - 52 |
Evidence | experimental; Illumina [2] |
Mature sequence bdi-miR169e-3p |
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Accession | MIMAT0027065 |
Sequence |
115 - ggcagucuccuuggcuagc - 133 |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:21371551
"Implementation of a de novo genome-wide computational approach for updating Brachypodium miRNAs"
Genomics. 97:282-293(2011).
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2 |
PMID:23264558
"Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon"
Mol Plant. 6:423-443(2013).
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