Stem-loop sequence bdi-MIR169e

Accession MI0018114
Description Brachypodium distachyon miR169e stem-loop
Gene family MIPF0000012; MIR169_1
Stem-loop 
---   ua     -u          uug    -uga          u    u       c   ucc  ccuu      u      auu 
   ccu  caugg  gauaaggggu   gccc    uagccaagga gacu gccugug aug   uc    gaucgc ugcaua   u
   |||  |||||  ||||||||||   ||||    |||||||||| |||| ||||||| |||   ||    |||||| ||||||    
   gga  guacc  cuauucuccg   uggg    aucgguuccu cuga cggacac uau   ag    cuagug acguau   c
ucc   uc     uc          ---    uccg          -    -       -   -uu  --cu      u      aua
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Genome context
Coordinates (v1.0) Overlapping transcripts
chr3: 43441526-43441689 [+]
intergenic
Clustered miRNAs
< 10kb from bdi-MIR169e
bdi-MIR169e chr3: 43441526-43441689 [+]
bdi-MIR169g chr3: 43444486-43444666 [+]

Mature sequence bdi-miR169e

Accession MIMAT0020689
Sequence

32 -  

uagccaaggaugacuugccug

 - 52

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Evidence not experimental

References

1
PMID:21371551 "Implementation of a de novo genome-wide computational approach for updating Brachypodium miRNAs" Baev V, Milev I, Naydenov M, Apostolova E, Minkov G, Minkov I, Yahubyan G Genomics. 97:282-293(2011).