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miRBase |
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Stem-loop sequence bdi-MIR5178 |
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Accession | MI0018149 (change log) | ||||
Description | Brachypodium distachyon miR5178 stem-loop | ||||
Stem-loop |
--- gc a c ug a c ugugacuaugauccaacucugacccauagcacaauaua 5' auuaggg auuugauagg aauuuaa ugcu gg ccgccggucagagccauguggcaga aaaa u ||||||| |||||||||| ||||||| |||| || ||||||||||||||||||||||||| |||| 3' uaauccu uaaacugucc uuagauu gcga cc gguggccagucucgguauaccguuu uuuu c cuc -a g a gu g u uggcacuagcuacccgggcucaccguuccugauucaag |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence bdi-miR5178-5p |
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Accession | MIMAT0027083 |
Sequence |
31 - cuugggaccgccggucagagc - 51 |
Evidence | experimental; Illumina [2] |
Mature sequence bdi-miR5178-3p |
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Accession | MIMAT0020725 |
Sequence |
164 - ucugaccggugggccugagcg - 184 |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:21371551
"Implementation of a de novo genome-wide computational approach for updating Brachypodium miRNAs"
Genomics. 97:282-293(2011).
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2 |
PMID:23264558
"Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon"
Mol Plant. 6:423-443(2013).
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