miRBase entry: cme-MIR164a

Stem-loop cme-MIR164a


Accession
MI0018163
Description
Cucumis melo cme-MIR164a precursor miRNA
Gene family
MIPF0000045; MIR164

Literature search
1 open access papers mention cme-MIR164a
(1 sentences)

Sequence

augaagagcaagaUGGAGAAGCAGGGCACGUGCUuuacuaacucaguuccaauucaaaaaucccuucuuuucuuuuucuuucucuuuuucu
..((((((.((((.(((((((.((((....((..(((((.....)))...))..)).....)))).)))))))...)))).))))))....

Structure
--au      c    --U       C    -CACG  CU  ---   a 
    gaagag aaga   GGAGAAG AGGG     UG  uu   acu a
    |||||| ||||   ||||||| ||||     ||  ||   ||| c
    uuucuc uucu   ucuuuuc uccc     ac  aa   uga u
ucuu      u    uuu       u    uaaaa  uu  ccu   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cme-miR164a

Accession MIMAT0022749
Description Cucumis melo cme-miR164a mature miRNA
Sequence 14 - UGGAGAAGCAGGGCACGUGCU - 34
Evidence experimental
cloned [1]

References

  1. PubMed ID: 21533245
    RNA captor: a tool for RNA characterization
    "Clepet C"
    "PLoS One (2011) 6:e18445