Stem-loop ssp-MIR167b

Accession

MI0018193

Description

Saccharum sp. ssp-MIR167b precursor miRNA

Gene family

MIPF0000125; MIR167_2

Sequence

ggUGAAGCUGCCAGCAUGAUCUGauggugguauauaugaauauaugaugucuuuaccucugaucucucccugacugucacggaucgaugaauccaggaugaggggagggaauaaugagcaucaggucaugcuguaguuucauc
(((((((((((.((((((((((((((((.((((((....)))))).))........(((...(((((((((..(.(((..((((......))))..)))).))))))))).....))))))))))))))))))))))))))))

Structure

           C              gugguauauaugaauauaugaugucuuuac   --uga         ga u   ac    cg 
ggUGAAGCUGC AGCAUGAUCUGaug                              cuc     ucucucccu  c guc  ggau  a
||||||||||| ||||||||||||||                              |||     |||||||||  | |||  ||||   
cuacuuugaug ucguacuggacuac                              gag     agggagggg  g uag  ccua  u
           -              ------------------------------   uaaua         -a -   ga    ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssp-miR167b

• Accession: MIMAT0020293
• Description: Saccharum sp. ssp-miR167b mature miRNA
• Sequence: 3 - UGAAGCUGCCAGCAUGAUCUG - 23
• Evidence: not_experimental

References

1. PubMed ID: 21092324
   Identification and expression analysis of microRNAs and targets in the biofuel crop sugarcane
   Zanca AS, Vicentini R, Ortiz-Morea FA, Del Bem LE, da Silva MJ, Vincentz M, Nogueira FT
   BMC Plant Biol (2010) 10:260