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miRBase |
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Stem-loop sequence bdi-MIR395e |
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Accession | MI0018220 (change log) | |||||||||||||||||||||||
Description | Brachypodium distachyon miR395e stem-loop | |||||||||||||||||||||||
Gene family | MIPF0000016; MIR395 | |||||||||||||||||||||||
Literature search |
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3 open access papers mention bdi-MIR395e | |||||||||||||||||||||||
Stem-loop |
ug u u g -a - ag u u u uuguu uugc guu 5' guugguugucacc gaguucucc caaa cacuuca u gc uagcu cu g gcc cc gca cacu u ||||||||||||| ||||||||| |||| ||||||| | || ||||| || | ||| || ||| |||| 3' cgaccaacggugg cucaagggg guuu gugaagu a cg gucga ga c cgg gg cgu guga u gu - - g ca u ga - - - ---uu ---- aua |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence bdi-miR395e-5p |
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Accession | MIMAT0027089 |
Sequence |
18 - guucuccucaaaucacuucagu - 39 |
Evidence | experimental; Illumina [2] |
Mature sequence bdi-miR395e-3p |
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Accession | MIMAT0020745 |
Sequence |
116 - ugaaguguuugggggaacuc - 135 |
Evidence | experimental; Illumina [1-2] |
References |
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1 |
PMID:19772667
"Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response"
BMC Genomics. 10:449(2009).
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2 |
PMID:23264558
"Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon"
Mol Plant. 6:423-443(2013).
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